CDC.md

@@ -59,7 +59,7 @@ Components excluded for now:
 
 ### Network
 
-[[/pics/ycm_cell_cycle_scheme_20131011.png]]
+![](/pics/ycm_cell_cycle_scheme_20131011.png)
 
 We implemented this NW in python. Is running, pars arbitrary and not adjusted -> lot of flat-lines.
 
@@ -74,13 +74,13 @@ We implemented this NW in python. Is running, pars arbitrary and not adjusted ->
 * Parameters adjusted -> protein concentrations still not correct, but stable oscillations. 
  
 Far1-mechanism (separate view):
-[[/pics/ycm_cell_cycle_scheme_20140122_Far1.png]]
+![](/pics/ycm_cell_cycle_scheme_20140122_Far1.png)
 * We included two types of phosphorylations on Far1 that play a role in the mechanism:
     * T306: Stabilizing phosphorylation by Fus3
 	* S86: Phosphorylation mediated by Cln2 leading to destruction of Far1
 
 The updated version of the Network including the new Far1-mechanism (see above) looks as follows:
-[[/pics/ycm_cell_cycle_scheme_20140124.png]]
+![](/pics/ycm_cell_cycle_scheme_20140124.png)
 
 #### Issues
 * Sic1 level deceases while cell is arrested
@@ -115,7 +115,7 @@ The updated version of the Network including the new Far1-mechanism (see above)
 * For consistency, all species are now produced as well as degraded.
 * CDC module was split into a regulating module and the GEX_TRX/TRL modules to represent the different functions.
 * The current model structure looks like this:
-[[/pics/ycm_cell_cycle_scheme_20170925.png]]
+![](/pics/ycm_cell_cycle_scheme_20170925.png)
 
 ## Other Cell Cycle Models
 **Barik et al. (2010) [20739927](http://www.ncbi.nlm.nih.gov/pubmed/20739927):**